Publications

2024

Hydrodynamical Simulations of Proton Ingestion Flashes in Type I X-Ray Bursts
Guichandut, Simon, Zingale, Michael, & Cumming, Andrew 2024, The Astrophysical Journal, 975, 2, p. 250
The Challenges of Modeling Astrophysical Reacting Flows
Zingale, Michael, Bhargava, Khanak, Brady, Ryan, Chen, Zhi, Guichandut, Simon, Johnson, Eric T., Katz, Max, & Smith Clark, Alexander 2024, arXiv e-prints, p. arXiv:2411.12491, submitted to Proceedings of Astronum 2024
Well-balanced Hydrodynamics for the Piecewise Parabolic Method with Characteristic Tracing
Zingale, Michael 2024, Research Notes of the AAS, 8, 9, p. 219
Sensitivity of Simulations of Double-detonation Type Ia Supernovae to Integration Methodology
Zingale, Michael, Chen, Zhi, Rasmussen, Melissa, Polin, Abigail, Katz, Max, Clark, Alexander Smith, & Johnson, Eric T. 2024, The Astrophysical Journal, 966, 2, p. 150
A Framework for Exploring Nuclear Physics Sensitivity in Numerical Simulations
Chen, Zhi, Johnson, Eric T., Katz, Max, Clark, Alexander Smith, Boyd, Brendan, & Zingale, Michael 2024, Journal of Physics: Conference Series, 2742, 1, p. 012021
Sensitivity of 3D Convective Urca Simulations to Changes in Urca Reactions
Boyd, B, Clark, A Smith, Calder, A C, Townsley, D M, & Zingale, M 2024, Journal of Physics: Conference Series, 2742, 1, p. 012001
Simulating Lateral H/He Flame Propagation in Type I X-ray Bursts
Johnson, Eric T., & Zingale, Michael 2024, Journal of Physics: Conference Series, 2742, 1, p. 012005
pynucastro 2.1: an update on the development of a python library for nuclear astrophysics
Clark, Alexander Smith, Johnson, Eric T., Chen, Zhi, Eiden, Kiran, Zingale, Michael, Boyd, Brendan, Johnson, Parker T., & DaCosta, Luis Rangel 2024, Journal of Physics: Conference Series, 2742, 1, p. 012003
Strong Coupling of Hydrodynamics and Reactions in Nuclear Statistical Equilibrium for Modeling Convection in Massive Stars
Zingale, Michael, Chen, Zhi, Johnson, Eric T., Katz, Max P., & Smith Clark, Alexander 2024, arXiv e-prints, p. arXiv:2403.14786, accepted to ApJ
3D Convective Urca Process in a Simmering White Dwarf
Boyd, B., Calder, A. C., Townsley, D., & Zingale, M. 2024, submitted to ApJ
Approximating Convective Urca Cooling in a Simmering White Dwarf
Boyd, B., Calder, A. C., Townsley, D. M., & Zingale, M. 2024, submitted to Proceedings of Astronum 2024

2023

A Fully Explicit Integrator for Modeling Astrophysical Reactive Flows
Johnson, Parker, Zingale, Michael, Johnson, Eric T., Smith, Alexander, & Niemeyer, Kyle E. 2023, Research Notes of the AAS, 7, 12, p. 282
MESA-Web: A cloud resource for stellar evolution in astronomy curriculum
Fields, Carl E., Townsend, Richard H. D., Dotter, A. L., Zingale, Michael, & Timmes, F. X. 2023, Astronomy Education Journal, 3, 1, p. 047ra
Sensitivity of He Flames in X-Ray Bursts to Nuclear Physics
Chen, Zhi, Zingale, Michael, & Eiden, Kiran 2023, The Astrophysical Journal, 955, 2, p. 128
Comparing Early Evolution of Flames in X-Ray Bursts in Two and Three Dimensions
Zingale, Michael, Eiden, Kiran, & Katz, Max 2023, The Astrophysical Journal, 952, 2, p. 160
pynucastro: A Python Library for Nuclear Astrophysics
Smith, Alexander I., Johnson, Eric T., Chen, Zhi, Eiden, Kiran, Willcox, Donald E., Boyd, Brendan, Cao, Lyra, DeGrendele, Christopher J., & Zingale, Michael 2023, The Astrophysical Journal, 947, 2, p. 65

2022

Horizons: nuclear astrophysics in the 2020s and beyond
Schatz, H. et al. 2022, Journal of Physics G Nuclear Physics, 49, 11, p. 110502
Neural Networks for Nuclear Reactions in MAESTROeX
Fan, Duoming, Willcox, Donald E., DeGrendele, Christopher, Zingale, Michael, & Nonaka, Andrew 2022, The Astrophysical Journal, 940, 2, p. 134
An Improved Method for Coupling Hydrodynamics with Astrophysical Reaction Networks
Zingale, M., Katz, M. P., Nonaka, A., & Rasmussen, M. 2022, The Astrophysical Journal, 936, 1, p. 6
Teaching and Learning with Jupyter
Barba, Lorena A., Barker, Lecia J., Blank, Douglas S., Brown, Jed, Downey, Allen, George, Timothy, Heagy, Lindsey J., Mandli, Kyle, Moore, Jason K., Lippert, David, Niemeyer, Kyle, Watkins, Ryan, West, Richard, Wickes, Elizabeth, Willling, Carol, & Zingale, Michael 2022

2021

Practical Effects of Integrating Temperature with Strang Split Reactions
Zingale, M., Katz, M. P., Willcox, D. E., & Harpole, A. 2021, Research Notes of the AAS, 5, 4, p. 71
Dynamics of Laterally Propagating Flames in X-ray Bursts. II. Realistic Burning & Rotation
Harpole, A., Ford, N. M., Eiden, K., Zingale, M., Willcox, D. E., Cavecchi, Y., & Katz, M. P. 2021, ApJ, 912, 1, p. 36

2020

Modelling low Mach number stellar hydrodynamics with MAESTROeX
Harpole, A., Fan, D., Katz, M. P., Nonaka, A. J., Willcox, D. E., & Zingale, M. 2020, Journal of Physics: Conference Series, 1623, p. 012015, 14th Int. Conf. on Numerical Modeling of Space Plasma Flows: ASTRONUM-2019 1-5 July 2019, Paris, France
The Castro AMR Simulation Code: Current and Future Developments
Zingale, M., Almgren, A. S., Barrios Sazo, M., Bell, J. B., Eiden, K., Harpole, A., Katz, M. P., Nonaka, A. J., Willcox, D. E., & Zhang, W. 2020, Journal of Physics: Conference Series, 1623, p. 012021, 14th Int. Conf. on Numerical Modeling of Space Plasma Flows: ASTRONUM-2019 1-5 July 2019, Paris, France
Dynamics of Laterally Propagating Flames in X-Ray Bursts. I. Burning Front Structure
Eiden, Kiran, Zingale, Michael, Harpole, Alice, Willcox, Donald, Cavecchi, Yuri, & Katz, Max P. 2020, ApJ, 894, 1, p. 6
Preparing Nuclear Astrophysics for Exascale
Katz, Max P., Almgren, Ann, Sazo, Maria Barrios, Eiden, Kiran, Gott, Kevin, Harpole, Alice, Sexton, Jean M., Willcox, Don E., Zhang, Weiqun, & Zingale, Michael 2020, in Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis
CASTRO: A Massively Parallel Compressible Astrophysics Simulation Code
Almgren, Ann, Sazo, Maria Barrios, Bell, John, Harpole, Alice, Katz, Max, Sexton, Jean, Willcox, Donald, Zhang, Weiqun, & Zingale, Michael 2020, Journal of Open Source Software, 5, 54, p. 2513

2019

MAESTROeX: A Massively Parallel Low Mach Number Astrophysical Solver
Fan, Duoming, Nonaka, Andrew, Almgren, Ann S., Harpole, Alice, & Zingale, Michael 2019, ApJ, 887, 2, p. 212
Improved Coupling of Hydrodynamics and Nuclear Reactions via Spectral Deferred Corrections
Zingale, M., Katz, M. P., Bell, J. B., Minion, M. L., Nonaka, A. J., & Zhang, W. 2019, ApJ, 886, 2, p. 105
MAESTROeX: A Massively Parallel Low Mach Number Astrophysical Solver
Fan, Duoming, Nonaka, Andrew, Almgren, Ann, Willcox, Donald, Harpole, Alice, & Zingale, Michael 2019, The Journal of Open Source Software, 4, 43, p. 1757
Thermonuclear (Type Ia) Supernovae and Progenitor Evolution
Calder, A C, Willcox, D E, DeGrendele, C J, Shangase, D, Zingale, M, & Townsley, D M 2019, Journal of Physics: Conference Series, 1225, p. 012002, 13th Int. Conf. on Numerical Modeling of Space Plasma Flows: ASTRONUM-2018 25-29 June 2018, Panama City Beach, Florida, USA
Toward Resolved Simulations of Burning Fronts in Thermonuclear X-ray Bursts
Zingale, M., Eiden, K., Cavecchi, Y., Harpole, A., Bell, J. B., Chang, M., Hawke, I., Katz, M. P., Malone, C. M., Nonaka, A. J., Willcox, D. E., & Zhang, W. 2019, Journal of Physics: Conference Series, 1225, p. 012005, 13th Int. Conf. on Numerical Modeling of Space Plasma Flows: ASTRONUM-2018 25-29 June 2018, Panama City Beach, Florida, USA
Numerical Stability of Detonations in White Dwarf Simulations
Katz, Max P., & Zingale, Michael 2019, The Astrophysical Journal, 874, 2, p. 169
Observatory science with eXTP
in 't Zand, Jean J. M. et al. 2019, Science China Physics, Mechanics & Astronomy, 62, p. 29506
pyro: a framework for hydrodynamics explorations and prototyping
Harpole, A., Zingale, M., Hawke, I., & Chegini, T. 2019, Journal of Open Source Software, 4, 34, p. 1265
AMReX: a framework for block-structured adaptive mesh refinement
Zhang, W., Almgren, A., Beckner, V., Bell, J., Blaschke, J., Chan, C., Day, M., Friesen, B., Gott, K., Graves, D., Katz, M. P., Myers, A., Nguyen, T., Nonaka, A., Rosso, M., Williams, S., & Zingale, M 2019, Journal of Open Source Software, 4, 37, p. 1370

2018

Turbulence-driven thermal and kinetic energy fluxes in the atmospheres of hot Jupiters
Ryu, Taeho, Zingale, Michael, & Perna, Rosalba 2018, Monthly Notices of the Royal Astronomical Society, 481, 4, p. 5517–5531
Best Practices in Running Collaborative GPU Hackathons: Advancing Scientific Applications with a Sustained Impact
Chandrasekaran, S., Juckeland, G., Lin, M., Otten, M., Pleiter, D., Stone, J. E., Lucio-Vega, J., Zingale, M., & Foertter, F. 2018, Computing in Science Engineering, 20, 4, p. 95–106
Meeting the Challenges of Modeling Astrophysical Thermonuclear Explosions: Castro, Maestro, and the AMReX Astrophysics Suite
Zingale, M., Almgren, A. S., Sazo, M. G. Barrios, Beckner, V. E., Bell, J. B., Friesen, B., Jacobs, A. M., Katz, M. P., Malone, C. M., Nonaka, A. J., Willcox, D. E., & Zhang, W. 2018, Journal of Physics: Conference Series, 1031, 1, p. 012024, 12th Int. Conf. on Numerical Modeling of Space Plasma Flows: ASTRONUM-2017 26-30 June 2017, Saint-Malo, France
pynucastro: an interface to nuclear reaction rates and code generator for reaction network equations
Willcox, D. E., & Zingale, M. 2018, Journal of Open Source Software, 3, 23, p. 588

2017

White Paper on Nuclear Astrophysics and Low Energy Nuclear Physics Part 1. Nuclear Astrophysics
Arcones, A. et al. 2017, Progress in Particle and Nuclear Physics, 94, p. 1–67
Toward simulating Black Widow binaries with CASTRO
Karpov, P., Sazo, M. B., Zingale, M., Zhang, W., & Calder, A. C. 2017, Journal of Computational Science Education, 8, p. 25–29

2016

Low Mach Number Modeling of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs II: Bulk Properties of Simple Models
Jacobs, A. M., Zingale, M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2016, ApJ, 827, p. 84
The Importance of Computation in Astronomy Education
Zingale, M., Timmes, F. X., Fisher, R., & O'Shea, B. W. 2016, ArXiv e-prints
White Dwarf Mergers on Adaptive Meshes. I. Methodology and Code Verification
Katz, M. P., Zingale, M., Calder, A. C., Swesty, F. D., Almgren, A. S., & Zhang, W. 2016, ApJ, 819, p. 94
White Paper on Nuclear Astrophysics
Arcones, A. et al. 2016, ArXiv e-prints

2015

Modeling Astrophysical Explosions with Sustained Exascale Computing
Zingale, M., Calder, A. C., Malone, C. M., & Timmes, F. X. 2015, ArXiv e-prints, White paper in response to RFI NOT-GM-15-122: Science Drivers Requiring Capable Exascale High Performance Computing
Comparisons of Two- and Three-Dimensional Convection in Type I X-Ray Bursts
Zingale, M., Malone, C. M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2015, ApJ, 807, p. 60
On the Piecewise Parabolic Method for Compressible Flow With Stellar Equations of State
Zingale, M., & Katz, M. P. 2015, ApJS, 216, p. 31
The LOFT perspective on neutron star thermonuclear bursts
in 't Zand, J. J. M. et al. 2015, ArXiv e-prints, White Paper in Support of the Mission Concept of the Large Observatory for X-ray Timing
Understanding Ignition in Type Ia Supernovae
Zingale, M., Jacobs, A., Almgren, A. S., Bell, J. B., Nonaka, A., Malone, C., & Woosley, S. 2015, in Proceedings of the International Colloquium on the Dynamics of Explosions and Reactive Systems (ICDERS)

2014

pyro: A teaching code for computational astrophysical hydrodynamics
Zingale, M. 2014, Astronomy and Computing, 6, p. 52–62
Multidimensional Modeling of Type I X-Ray Bursts. II. Two-dimensional Convection in a Mixed H/He Accretor
Malone, C. M., Zingale, M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2014, ApJ, 788, p. 115
The Deflagration Stage of Chandrasekhar Mass Models for Type Ia Supernovae. I. Early Evolution
Malone, C. M., Nonaka, A., Woosley, S. E., Almgren, A. S., Bell, J. B., Dong, S., & Zingale, M. 2014, ApJ, 782, p. 11
Low Mach Number Modeling of Stratified Flows
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2014, in Finite Volumes for Complex Applications VII: Methods, Theoretical Aspects---FVCA 7, Berlin, June 2014, ed. Fuhrmann, J., Ohlberger, M., & Rohde, C., p. 3–15

2013

Low Mach Number Modeling of Core Convection in Massive Stars
Gilet, C., Almgren, A. S., Bell, J. B., Nonaka, A., Woosley, S. E., & Zingale, M. 2013, ApJ, 773, p. 137
Low Mach Number Modeling of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs. I. Methodology
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Orvedahl, R. J. 2013, ApJ, 764, p. 97

2012

High-resolution Simulations of Convection Preceding Ignition in Type Ia Supernovae Using Adaptive Mesh Refinement
Nonaka, A., Aspden, A. J., Zingale, M., Almgren, A. S., Bell, J. B., & Woosley, S. E. 2012, ApJ, 745, p. 73

2011

From Convection to Explosion: End-to-End Simulation of Type Ia Supernovae
Nonaka, A., Almgren, A. S., Bell, J. B., Ma, H., Woosley, S. E., & Zingale, M. 2011, ArXiv e-prints, Proceedings of SciDAC 2011, Denver, Co, July 10-14, 2011
The Convective Phase Preceding Type Ia Supernovae
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Woosley, S. E. 2011, ApJ, 740, p. 8
Multidimensional Modeling of Type I X-ray Bursts. I. Two-dimensional Convection Prior to the Outburst of a Pure $^4$He Accretor
Malone, C. M., Nonaka, A., Almgren, A. S., Bell, J. B., & Zingale, M. 2011, ApJ, 728, p. 118

2010

MAESTRO, CASTRO, and SEDONA — Petascale Codes for Astrophysical Applications
Almgren, A., Bell, J., Kasen, D., Lijewski, M., Nonaka, A., Nugent, P., Rendleman, C., Thomas, R., & Zingale, M. 2010, ArXiv e-prints, Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory
MAESTRO: An Adaptive Low Mach Number Hydrodynamics Algorithm for Stellar Flows
Nonaka, A., Almgren, A. S., Bell, J. B., Lijewski, M. J., Malone, C. M., & Zingale, M. 2010, ApJS, 188, p. 358–383
CASTRO: A New Compressible Astrophysical Solver. I. Hydrodynamics and Self-gravity
Almgren, A. S., Beckner, V. E., Bell, J. B., Day, M. S., Howell, L. H., Joggerst, C. C., Lijewski, M. J., Nonaka, A., Singer, M., & Zingale, M. 2010, ApJ, 715, p. 1221–1238
Type Ia Supernovae: Advances in Large Scale Simulation
Ma, H., Zingale, M., Woosley, S. E., Aspden, A. J., Bell, J. B., Almgren, A. S., Nonaka, A., & Dong, S. 2010, in Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory

2009

Low Mach Number Modeling of Type IA Supernovae. IV. White Dwarf Convection
Zingale, M., Almgren, A. S., Bell, J. B., Nonaka, A., & Woosley, S. E. 2009, ApJ, 704, p. 196–210
Type Ia supernovae: Advances in large scale simulation
Woosley, S. E., Almgren, A. S., Aspden, A. J., Bell, J. B., Kasen, D., Kerstein, A. R., Ma, H., Nonaka, A., & Zingale, M. 2009, Journal of Physics Conference Series, 180, 1, p. 012023
A New Low Mach Number Approach in Astrophysics
Almgren, Ann S., Bell, John B., Nonaka, Andy, & Zingale, Michael 2009, Computing in Science and Engineering, 11, 2, p. 24–33

2008

Turbulence-Flame Interactions in Type Ia Supernovae
Aspden, A. J., Bell, J. B., Day, M. S., Woosley, S. E., & Zingale, M. 2008, ApJ, 689, p. 1173–1185
Low Mach Number Modeling of Type Ia Supernovae. III. Reactions
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2008, ApJ, 684, p. 449–470
Astrophysical applications of the MAESTRO code
Zingale, M., Almgren, A. S., Bell, J. B., Malone, C. M., & Nonaka, A. 2008, Journal of Physics Conference Series, 125, 1, p. 012013

2007

MAESTRO: A Low Mach Number Stellar Hydrodynamics Code
Almgren, A. S., Bell, J. B., & Zingale, M. 2007, Journal of Physics Conference Series, 78, 1, p. 012085
Type Ia supernovae
Woosley, S. E., Almgren, A., Bell, J. B., Glatzmaier, G., Kasen, D., Kerstein, A. R., Ma, H., Nugent, P., Röpke, F., Sankaran, V., & Zingale, M. 2007, Journal of Physics Conference Series, 78, 1, p. 012081
Propagation of the First Flames in Type Ia Supernovae
Zingale, M., & Dursi, L. J. 2007, ApJ, 656, p. 333–346

2006

Low Mach Number Modeling of Type Ia Supernovae. II. Energy Evolution
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 649, p. 927–938
New approaches for modeling Type Ia supernovae
Zingale, M., Almgren, A. S., Bell, J. B., Day, M. S., Rendleman, C. A., & Woosley, S. E. 2006, Journal of Physics Conference Series, 46, p. 385–392
Low Mach Number Modeling of Type Ia Supernovae. I. Hydrodynamics
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 637, p. 922–936

2005

Three-dimensional Numerical Simulations of Rayleigh-Taylor Unstable Flames in Type Ia Supernovae
Zingale, M., Woosley, S. E., Rendleman, C. A., Day, M. S., & Bell, J. B. 2005, ApJ, 632, p. 1021–1034
The physics of flames in Type Ia supernovae
Zingale, M., Woosley, S. E., Bell, J. B., Day, M. S., & Rendleman, C. A. 2005, Journal of Physics Conference Series, 16, p. 405–409
Efficiency Gains from Time Refinement on AMR Meshes and Explicit Timestepping
Dursi, L.J., & Zingale, M. 2005, in Adaptive Mesh Refinement - Theory and Applications, ed. Plewa, Tomasz, Linde, Timur, & Gregory Weirs, V., 41, p. 103–113

2004

On the nonlinear evolution of wind-driven gravity waves
Alexakis, A., Calder, A. C., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Zingale, M., Timmes, F. X., Olson, K., & Ricker, P. 2004, Physics of Fluids, 16, p. 3256–3268
Direct Numerical Simulations of Type Ia Supernovae Flames. II. The Rayleigh-Taylor Instability
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. 2004, ApJ, 608, p. 883–906
A comparative study of the turbulent Rayleigh-Taylor instability using high-resolution three-dimensional numerical simulations: The Alpha-Group collaboration
Dimonte, G. et al. 2004, Physics of Fluids, 16, p. 1668–1693
Direct Numerical Simulations of Type Ia Supernovae Flames. I. The Landau-Darrieus Instability
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. 2004, ApJ, 606, p. 1029–1038
Adaptive low Mach number simulations of nuclear flame microphysics
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. A. 2004, Journal of Computational Physics, 195, p. 677–694
On Heavy Element Enrichment in Classical Novae
Alexakis, A., Calder, A. C., Heger, A., Brown, E. F., Dursi, L. J., Truran, J. W., Rosner, R., Lamb, D. Q., Timmes, F. X., Fryxell, B., Zingale, M., Ricker, P. M., & Olson, K. 2004, ApJ, 602, p. 931–937
Morphology of Rising Hydrodynamic and Magnetohydrodynamic Bubbles from Numerical Simulations
Robinson, K., Dursi, L. J., Ricker, P. M., Rosner, R., Calder, A. C., Zingale, M., Truran, J. W., Linde, T., Caceres, A., Fryxell, B., Olson, K., Riley, K., Siegel, A., & Vladimirova, N. 2004, ApJ, 601, p. 621–643
Simulations of Rising Hydrodynamic and Magnetohydrodynamic Bubbles
Ricker, P. M., Robinson, K., Dursi, L. J., Rosner, R., Calder, A. C., Zingale, M., Truran, J. W., Linde, T., Caceres, A., Fryxell, B., Olson, K., Riley, K., Siegel, A., & Vladimirova, N. 2004, in The Riddle of Cooling Flows in Galaxies and Clusters of galaxies, ed. Reiprich, T., Kempner, J., & Soker, N., p. 95
Validating Astrophysical Simulation Codes
Calder, Alan, Dursi, Jonathan, Fryxell, Bruce, Plewa, Tomek, Weirs, Greg, Dupont, Todd, Robey, Harry, Kane, Jave, Remington, Bruce, Timmes, Frank, Dimonte, Guy, Hayes, John, Zingale, Mike, Drake, Paul, Ricker, Paul, Stone, Jim, & Olson, Kevin 2004, Computing in Science and Engineering, 6, 5, p. 10–20

2003

The Response of Model and Astrophysical Thermonuclear Flames to Curvature and Stretch
Dursi, L. J., Zingale, M., Calder, A. C., Fryxell, B., Timmes, F. X., Vladimirova, N., Rosner, R., Caceres, A., Lamb, D. Q., Olson, K., Ricker, P. M., Riley, K., Siegel, A., & Truran, J. W. 2003, ApJ, 595, p. 955–979
Investigations of Pointwise Ignition of Helium Deflagrations on Neutron Stars
Zingale, M., Woosley, S. E., Cumming, A., Calder, A., Dursi, L. J., Fryxell, B., Olson, K., Ricker, P., Rosner, R., & Timmes, F. X. 2003, in 3D Stellar Evolution, ed. Turcotte, S., Keller, S. C., & Cavallo, R. M., 293, p. 329
Parallel netCDF: A High-Performance Scientific I/O Interface
Li, J., Laio, W.-K., Choudhary, A., Ross, R., Thakur, R., Gropp, W., Latham, R., Siegel, A., Gallagher, B., & Zingale, M. 2003, in Proceedings of SC2003

2002

Mapping Initial Hydrostatic Models in Godunov Codes
Zingale, M., Dursi, L. J., ZuHone, J., Calder, A. C., Fryxell, B., Plewa, T., Truran, J. W., Caceres, A., Olson, K., Ricker, P. M., Riley, K., Rosner, R., Siegel, A., Timmes, F. X., & Vladimirova, N. 2002, ApJS, 143, p. 539–565
On Validating an Astrophysical Simulation Code
Calder, A. C., Fryxell, B., Plewa, T., Rosner, R., Dursi, L. J., Weirs, V. G., Dupont, T., Robey, H. F., Kane, J. O., Remington, B. A., Drake, R. P., Dimonte, G., Zingale, M., Timmes, F. X., Olson, K., Ricker, P., MacNeice, P., & Tufo, H. M. 2002, ApJS, 143, p. 201–229
Onset of Convection on a Pre-Runaway White Dwarf
Dursi, L. J., Calder, A. C., Alexakis, A., Truran, J. W., Zingale, M., Fryxell, B., Ricker, P., Timmes, F. X., & Olson, K. 2002, in Classical Nova Explosions, ed. Hernanz, M., & José, J., 637, p. 139–143
Mixing by Non-linear Gravity Wave Breaking on a White Dwarf Surface
Calder, A. C., Alexakis, A., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Ricker, P., Zingale, M., Olson, K., Timmes, F. X., & MacNeice, P. 2002, in Classical Nova Explosions, ed. Hernanz, M., & José, J., 637, p. 134–138
Mixing by wave breaking at the surface of a white dwarf
Truran, J. W., Alexakis, A., Calder, A. C., Dursi, L. J., Zingale, M., Fryxell, B., Ricker, P., Timmes, F. X., Olson, K., & Rosner, R. 2002, in Nuclear Astrophysics, ed. Hillebrandt, W., & Müller, E., p. 186–190

2001

Quenching processes in flame-vortex interactions
Zingale, M., Niemeyer, J. C., Timmes, F. X., Dursi, L. J., Calder, A. C., Fryxell, B., Lamb, D. Q., MacNeice, P., Olson, K., Ricker, P. M., Rosner, R., Truran, J. W., & Tufo, H. M. 2001, in 20th Texas Symposium on relativistic astrophysics, ed. Wheeler, J. C., & Martel, H., 586, p. 490–492
Simulations of Astrophysical fluid instabilities
Calder, A. C., Fryxell, B., Rosner, R., Dursi, L. J., Olson, K., Ricker, P. M., Timmes, F. X., Zingale, M., MacNeice, P., & Tufo, H. M. 2001, in 20th Texas Symposium on relativistic astrophysics, ed. Wheeler, J. C., & Martel, H., 586, p. 484–486
Large-scale simulations of clusters of galaxies
Ricker, P. M., Calder, A. C., Dursi, L. J., Fryxell, B., Lamb, D. Q., MacNeice, P., Olson, K., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2001, in American Institute of Physics Conference Series, 583, p. 316–318
Adaptive mesh simulations of astrophysical detonations using the ASCI flash code
Fryxell, B., Calder, A. C., Dursi, L. J., Lamb, D. Q., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2001, in American Institute of Physics Conference Series, 583, p. 223–225
Numerical simulations of thermonuclear flashes on neutron stars
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., Truran, J. W., MacNeice, P., & Tufo, H. 2001, Nuclear Physics A, 688, p. 172–176
Helium Detonations on Neutron Stars
Zingale, M., Timmes, F. X., Fryxell, B., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., MacNeice, P., & Tufo, H. M. 2001, ApJS, 133, p. 195–220
A Case Study in Application I/O on Linux Clusters
Ross, R., Numi, D., Cheng, A., & Zingale, M. 2001, in Proceedings of SC2001

2000

FLASH: An Adaptive Mesh Hydrodynamics Code for Modeling Astrophysical Thermonuclear Flashes
Fryxell, B., Olson, K., Ricker, P., Timmes, F. X., Zingale, M., Lamb, D. Q., MacNeice, P., Rosner, R., Truran, J. W., & Tufo, H. 2000, ApJS, 131, p. 273–334
On the Cellular Structure of Carbon Detonations
Timmes, F. X., Zingale, M., Olson, K., Fryxell, B., Ricker, P., Calder, A. C., Dursi, L. J., Tufo, H., MacNeice, P., Truran, J. W., & Rosner, R. 2000, ApJ, 543, p. 938–954
Flash Code: Studying Astrophysical Thermonuclear Flashes
Rosner, R., Calder, A. C., Dursi, L. J., Fryxell, B., Lamb, D. Q., Niemeyer, J. C., Olson, K., Ricker, P., Timmes, F. X., Truran, J. W., Tufo, H., Young, Y., Zingale, M., Lusk, E., & Stevens, R. 2000, Computing in Science and Engineering, 2, p. 33
High-Performance Reactive Fluid Flow Simulations Using Adaptive Mesh Refinement on Thousands of Processors
Calder, A. C., Curtis, B. C., Dursi, L. J., Fryxell, B., Henry, G., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F. X., Tufo, H. M., Truran, J. W., & Zingale, M. 2000, in Proceedings of SC2000
Helium Detonations on Neutron Stars
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., & Rosner, R. 2000, in Nuclear Astrophysics, 2000, ed. Hillebrandt, W., & Müller, E., p. 38