publications

2017

White Paper on Nuclear Astrophysics and Low Energy Nuclear Physics Part 1. Nuclear Astrophysics [link]
Arcones, A., Bardayan, D., Beers, T., Berstein, L., Blackmon, J., Bronson, M., Brown, A., Brown, E., Brune, C., Champagne, A., Chieffi, A., Couture, A., Danielewicz, P., Diehl, R., El-Eid, M., Escher, J., Fields, B., Frohlich, C., Herwig, F., Hix, W. R., Iliadis, C., Lynch, W., McLaughlin, G., Meyer, B., Mezzacappa, A., Nunes, F., O'Shea, B., Prakash, M., Pritychenko, B., Reddy, S., Rehm, E., Rogachev, G., Rutledge, R., Schatz, H., Smith, M., Stairs, I., Steiner, A., Strohmayer, T., Timmes, F., Townsley, D., Wiescher, M., Zegers, R., & Zingale, M. 2017, Progress in Particle and Nuclear Physics, 94, p. 1–67
student paper: Toward simulating Black Widow binaries with CASTRO
Karpov, P., Sazo, M. B., Zingale, M., Zhang, W., & Calder, A. C. 2017, JOCSE, in press
The OLCF GPU Hackathon Series: The Story Behind Advancing Scientific Applications with a Sustained Impact
Chandrasekaren, S., Juckeland, G., Otten, M., Lin, M., Stone, J. E. amd Zingale, M., & Foertter, F. 2017, accepted to the EduHPC 2017 Workshop
Meeting the Challenges of Modeling Astrophysical Thermonuclear Explosions: Castro, Maestro, and the AMReX Astrophysics Suite [link]
Zingale, M., Almgren, A. S., Barrios Sazo, M. G., Beckner, V. E., Bell, J. B., Friesen, B., Jacobs, A. M., Katz, M. P., Malone, C. M., Nonaka, A. J., Willcox, D. E., & Zhang, W. 2017, ArXiv e-prints

2016

White Dwarf Mergers on Adaptive Meshes. I. Methodology and Code Verification [link]
Katz, M. P., Zingale, M., Calder, A. C., Swesty, F. D., Almgren, A. S., & Zhang, W. 2016, ApJ, 819, p. 94
White Paper on Nuclear Astrophysics [link]
Arcones, A., Bardayan, D., Beers, T., Berstein, L., Blackmon, J., Bronson, M., Brown, A., Brown, E., Brune, C., Champagne, A., Chieffi, A., Couture, A., Danielewicz, P., Diehl, R., El-Eid, M., Escher, J., Fields, B., Frohlich, C., Herwig, F., Hix, W. R., Iliadis, C., Lynch, W., McLaughlin, G., Meyer, B., Mezzacappa, A., Nunes, F., O'Shea, B., Prakash, M., Pritychenko, B., Reddy, S., Rehm, E., Rogachev, G., Rutledge, R., Schatz, H., Smith, M., Stairs, I., Steiner, A., Strohmayer, T., Timmes, F., Townsley, D., Wiescher, M., Zegers, R., & Zingale, M. 2016, ArXiv e-prints
The Importance of Computation in Astronomy Education [link]
Zingale, M., Timmes, F. X., Fisher, R., & O'Shea, B. W. 2016, ArXiv e-prints
Low Mach Number Modeling of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs II: Bulk Properties of Simple Models [link]
Jacobs, A. M., Zingale, M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2016, ApJ, 827, p. 84

2015

Understanding Ignition in Type Ia Supernovae
Zingale, M., Jacobs, A., Almgren, A. S., Bell, J. B., Nonaka, A., Malone, C., & Woosley, S. 2015, in Proceedings of the International Colloquium on the Dynamics of Explosions and Reactive Systems (ICDERS)
Modeling Astrophysical Explosions with Sustained Exascale Computing [link]
Zingale, M., Calder, A. C., Malone, C. M., & Timmes, F. X. 2015, ArXiv e-prints, White paper in response to RFI NOT-GM-15-122: Science Drivers Requiring Capable Exascale High Performance Computing
Comparisons of Two- and Three-Dimensional Convection in Type I X-Ray Bursts [link]
Zingale, M., Malone, C. M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2015, ApJ, 807, p. 60
The LOFT perspective on neutron star thermonuclear bursts [link]
in 't Zand, J. J. M., Altamirano, D., Ballantyne, D. R., Bhattacharyya, S., Brown, E. F., Cavecchi, Y., Chakrabarty, D., Chenevez, J., Cumming, A., Degenaar, N., Falanga, M., Galloway, D. K., Heger, A., José, J., Keek, L., Linares, M., Mahmoodifar, S., Malone, C. M., Méndez, M., Miller, M. C., Paerels, F. B. S., Poutanen, J., Rózanska, A., Schatz, H., Serino, M., Strohmayer, T. E., Suleimanov, V. F., Thielemann, F.-K., Watts, A. L., Weinberg, N. N., Woosley, S. E., Yu, W., Zhang, S., & Zingale, M. 2015, ArXiv e-prints, White Paper in Support of the Mission Concept of the Large Observatory for X-ray Timing
On the Piecewise Parabolic Method for Compressible Flow With Stellar Equations of State [link]
Zingale, M., & Katz, M. P. 2015, ApJS, 216, p. 31

2014

pyro: A teaching code for computational astrophysical hydrodynamics [link]
Zingale, M. 2014, Astronomy and Computing, 6, p. 52–62
Multidimensional Modeling of Type I X-Ray Bursts. II. Two-dimensional Convection in a Mixed H/He Accretor [link]
Malone, C. M., Zingale, M., Nonaka, A., Almgren, A. S., & Bell, J. B. 2014, ApJ, 788, p. 115
The Deflagration Stage of Chandrasekhar Mass Models for Type Ia Supernovae. I. Early Evolution [link]
Malone, C. M., Nonaka, A., Woosley, S. E., Almgren, A. S., Bell, J. B., Dong, S., & Zingale, M. 2014, ApJ, 782, p. 11
Low Mach Number Modeling of Stratified Flows [link]
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2014, in Finite Volumes for Complex Applications VII: Methods, Theoretical Aspects---FVCA 7, Berlin, June 2014, ed. Fuhrmann, J., Ohlberger, M., & Rohde, C., p. 3–15

2013

Low Mach Number Modeling of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs. I. Methodology [link]
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Orvedahl, R. J. 2013, ApJ, 764, p. 97
Low Mach Number Modeling of Core Convection in Massive Stars [link]
Gilet, C., Almgren, A. S., Bell, J. B., Nonaka, A., Woosley, S. E., & Zingale, M. 2013, ApJ, 773, p. 137

2012

High-resolution Simulations of Convection Preceding Ignition in Type Ia Supernovae Using Adaptive Mesh Refinement [link]
Nonaka, A., Aspden, A. J., Zingale, M., Almgren, A. S., Bell, J. B., & Woosley, S. E. 2012, ApJ, 745, p. 73

2011

The Convective Phase Preceding Type Ia Supernovae [link]
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Woosley, S. E. 2011, ApJ, 740, p. 8
From Convection to Explosion: End-to-End Simulation of Type Ia Supernovae [link]
Nonaka, A., Almgren, A. S., Bell, J. B., Ma, H., Woosley, S. E., & Zingale, M. 2011, ArXiv e-prints, Proceedings of SciDAC 2011, Denver, Co, July 10-14, 2011
Multidimensional Modeling of Type I X-ray Bursts. I. Two-dimensional Convection Prior to the Outburst of a Pure 4He Accretor [link]
Malone, C. M., Nonaka, A., Almgren, A. S., Bell, J. B., & Zingale, M. 2011, ApJ, 728, p. 118

2010

MAESTRO: An Adaptive Low Mach Number Hydrodynamics Algorithm for Stellar Flows [link]
Nonaka, A., Almgren, A. S., Bell, J. B., Lijewski, M. J., Malone, C. M., & Zingale, M. 2010, ApJS, 188, p. 358–383
CASTRO: A New Compressible Astrophysical Solver. I. Hydrodynamics and Self-gravity [link]
Almgren, A. S., Beckner, V. E., Bell, J. B., Day, M. S., Howell, L. H., Joggerst, C. C., Lijewski, M. J., Nonaka, A., Singer, M., & Zingale, M. 2010, ApJ, 715, p. 1221–1238
MAESTRO, CASTRO, and SEDONA — Petascale Codes for Astrophysical Applications [link]
Almgren, A., Bell, J., Kasen, D., Lijewski, M., Nonaka, A., Nugent, P., Rendleman, C., Thomas, R., & Zingale, M. 2010, ArXiv e-prints, Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory
Type Ia Supernovae: Advances in Large Scale Simulation [link]
Ma, H., Zingale, M., Woosley, S. E., Aspden, A. J., Bell, J. B., Almgren, A. S., Nonaka, A., & Dong, S. 2010, in Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory

2009

Low Mach Number Modeling of Type IA Supernovae. IV. White Dwarf Convection [link]
Zingale, M., Almgren, A. S., Bell, J. B., Nonaka, A., & Woosley, S. E. 2009, ApJ, 704, p. 196–210
Type Ia supernovae: Advances in large scale simulation [link]
Woosley, S. E., Almgren, A. S., Aspden, A. J., Bell, J. B., Kasen, D., Kerstein, A. R., Ma, H., Nonaka, A., & Zingale, M. 2009, Journal of Physics Conference Series, 180, p. 012023
A New Low Mach Number Approach in Astrophysics [link]
Almgren, Ann S., Bell, John B., Nonaka, Andy, & Zingale, Michael 2009, Computing in Science and Engineering, 11, p. 24–33

2008

Low Mach Number Modeling of Type Ia Supernovae. III. Reactions [link]
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2008, ApJ, 684, p. 449–470
Astrophysical applications of the MAESTRO code [link]
Zingale, M., Almgren, A. S., Bell, J. B., Malone, C. M., & Nonaka, A. 2008, Journal of Physics Conference Series, 125, p. 012013
Turbulence-Flame Interactions in Type Ia Supernovae [link]
Aspden, A. J., Bell, J. B., Day, M. S., Woosley, S. E., & Zingale, M. 2008, ApJ, 689, p. 1173–1185

2007

MAESTRO: A Low Mach Number Stellar Hydrodynamics Code [link]
Almgren, A. S., Bell, J. B., & Zingale, M. 2007, Journal of Physics Conference Series, 78, p. 012085
Type Ia supernovae [link]
Woosley, S. E., Almgren, A., Bell, J. B., Glatzmaier, G., Kasen, D., Kerstein, A. R., Ma, H., Nugent, P., Röpke, F., Sankaran, V., & Zingale, M. 2007, Journal of Physics Conference Series, 78, p. 012081
Propagation of the First Flames in Type Ia Supernovae [link]
Zingale, M., & Dursi, L. J. 2007, ApJ, 656, p. 333–346

2006

New approaches for modeling Type Ia supernovae [link]
Zingale, M., Almgren, A. S., Bell, J. B., Day, M. S., Rendleman, C. A., & Woosley, S. E. 2006, Journal of Physics Conference Series, 46, p. 385–392
Low Mach Number Modeling of Type Ia Supernovae. II. Energy Evolution [link]
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 649, p. 927–938
Low Mach Number Modeling of Type Ia Supernovae. I. Hydrodynamics [link]
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 637, p. 922–936

2005

Three-dimensional Numerical Simulations of Rayleigh-Taylor Unstable Flames in Type Ia Supernovae [link]
Zingale, M., Woosley, S. E., Rendleman, C. A., Day, M. S., & Bell, J. B. 2005, ApJ, 632, p. 1021–1034
The physics of flames in Type Ia supernovae [link]
Zingale, M., Woosley, S. E., Bell, J. B., Day, M. S., & Rendleman, C. A. 2005, Journal of Physics Conference Series, 16, p. 405–409
Efficiency Gains from Time Refinement on AMR Meshes and Explicit Timestepping [link]
Dursi, L.J., & Zingale, M. 2005, in Adaptive Mesh Refinement - Theory and Applications, ed. Plewa, Tomasz, Linde, Timur, & Gregory Weirs, V., 41, p. 103–113

2004

On the nonlinear evolution of wind-driven gravity waves [link]
Alexakis, A., Calder, A. C., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Zingale, M., Timmes, F. X., Olson, K., & Ricker, P. 2004, Physics of Fluids, 16, p. 3256–3268
A comparative study of the turbulent Rayleigh-Taylor instability using high-resolution three-dimensional numerical simulations: The Alpha-Group collaboration [link]
Dimonte, G., Youngs, D. L., Dimits, A., Weber, S., Marinak, M., Wunsch, S., Garasi, C., Robinson, A., Andrews, M. J., Ramaprabhu, P., Calder, A. C., Fryxell, B., Biello, J., Dursi, L., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F., Tufo, H., Young, Y.-N., & Zingale, M. 2004, Physics of Fluids, 16, p. 1668–1693
Direct Numerical Simulations of Type Ia Supernovae Flames. I. The Landau-Darrieus Instability [link]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. 2004, ApJ, 606, p. 1029–1038
Direct Numerical Simulations of Type Ia Supernovae Flames. II. The Rayleigh-Taylor Instability [link]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. 2004, ApJ, 608, p. 883–906
On Heavy Element Enrichment in Classical Novae [link]
Alexakis, A., Calder, A. C., Heger, A., Brown, E. F., Dursi, L. J., Truran, J. W., Rosner, R., Lamb, D. Q., Timmes, F. X., Fryxell, B., Zingale, M., Ricker, P. M., & Olson, K. 2004, ApJ, 602, p. 931–937
Morphology of Rising Hydrodynamic and Magnetohydrodynamic Bubbles from Numerical Simulations [link]
Robinson, K., Dursi, L. J., Ricker, P. M., Rosner, R., Calder, A. C., Zingale, M., Truran, J. W., Linde, T., Caceres, A., Fryxell, B., Olson, K., Riley, K., Siegel, A., & Vladimirova, N. 2004, ApJ, 601, p. 621–643
Adaptive low Mach number simulations of nuclear flame microphysics [link]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E., & Zingale, M. A. 2004, Journal of Computational Physics, 195, p. 677–694
Simulations of Rising Hydrodynamic and Magnetohydrodynamic Bubbles [link]
Ricker, P. M., Robinson, K., Dursi, L. J., Rosner, R., Calder, A. C., Zingale, M., Truran, J. W., Linde, T., Caceres, A., Fryxell, B., Olson, K., Riley, K., Siegel, A., & Vladimirova, N. 2004, in The Riddle of Cooling Flows in Galaxies and Clusters of galaxies, ed. Reiprich, T., Kempner, J., & Soker, N., p. 95
Validating Astrophysical Simulation Codes [link]
Calder, Alan, Dursi, Jonathan, Fryxell, Bruce, Plewa, Tomek, Weirs, Greg, Dupont, Todd, Robey, Harry, Kane, Jave, Remington, Bruce, Timmes, Frank, Dimonte, Guy, Hayes, John, Zingale, Mike, Drake, Paul, Ricker, Paul, Stone, Jim, & Olson, Kevin 2004, Computing in Science and Engineering, 6, p. 10–20

2003

The Response of Model and Astrophysical Thermonuclear Flames to Curvature and Stretch [link]
Dursi, L. J., Zingale, M., Calder, A. C., Fryxell, B., Timmes, F. X., Vladimirova, N., Rosner, R., Caceres, A., Lamb, D. Q., Olson, K., Ricker, P. M., Riley, K., Siegel, A., & Truran, J. W. 2003, ApJ, 595, p. 955–979
Investigations of Pointwise Ignition of Helium Deflagrations on Neutron Stars [link]
Zingale, M., Woosley, S. E., Cumming, A., Calder, A., Dursi, L. J., Fryxell, B., Olson, K., Ricker, P., Rosner, R., & Timmes, F. X. 2003, in 3D Stellar Evolution, ed. Turcotte, S., Keller, S. C., & Cavallo, R. M., 293, p. 329
Parallel netCDF: A High-Performance Scientific I/O Interface [link]
Li, J., Laio, W.-K., Choudhary, A., Ross, R., Thakur, R., Gropp, W., Latham, R., Siegel, A., Gallagher, B., & Zingale, M. 2003, in Proceedings of SC2003

2002

On Validating an Astrophysical Simulation Code [link]
Calder, A. C., Fryxell, B., Plewa, T., Rosner, R., Dursi, L. J., Weirs, V. G., Dupont, T., Robey, H. F., Kane, J. O., Remington, B. A., Drake, R. P., Dimonte, G., Zingale, M., Timmes, F. X., Olson, K., Ricker, P., MacNeice, P., & Tufo, H. M. 2002, ApJS, 143, p. 201–229
Onset of Convection on a Pre-Runaway White Dwarf [link]
Dursi, L. J., Calder, A. C., Alexakis, A., Truran, J. W., Zingale, M., Fryxell, B., Ricker, P., Timmes, F. X., & Olson, K. 2002, in Classical Nova Explosions, ed. Hernanz, M., & José, J., 637, p. 139–143
Mixing by Non-linear Gravity Wave Breaking on a White Dwarf Surface [link]
Calder, A. C., Alexakis, A., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Ricker, P., Zingale, M., Olson, K., Timmes, F. X., & MacNeice, P. 2002, in Classical Nova Explosions, ed. Hernanz, M., & José, J., 637, p. 134–138
Mapping Initial Hydrostatic Models in Godunov Codes [link]
Zingale, M., Dursi, L. J., ZuHone, J., Calder, A. C., Fryxell, B., Plewa, T., Truran, J. W., Caceres, A., Olson, K., Ricker, P. M., Riley, K., Rosner, R., Siegel, A., Timmes, F. X., & Vladimirova, N. 2002, ApJS, 143, p. 539–565
Mixing by wave breaking at the surface of a white dwarf [link]
Truran, J. W., Alexakis, A., Calder, A. C., Dursi, L. J., Zingale, M., Fryxell, B., Ricker, P., Timmes, F. X., Olson, K., & Rosner, R. 2002, in Nuclear Astrophysics, ed. Hillebrandt, W., & Müller, E., p. 186–190

2001

Quenching processes in flame-vortex interactions [link]
Zingale, M., Niemeyer, J. C., Timmes, F. X., Dursi, L. J., Calder, A. C., Fryxell, B., Lamb, D. Q., MacNeice, P., Olson, K., Ricker, P. M., Rosner, R., Truran, J. W., & Tufo, H. M. 2001, in 20th Texas Symposium on relativistic astrophysics, ed. Wheeler, J. C., & Martel, H., 586, p. 490–492
Simulations of Astrophysical fluid instabilities [link]
Calder, A. C., Fryxell, B., Rosner, R., Dursi, L. J., Olson, K., Ricker, P. M., Timmes, F. X., Zingale, M., MacNeice, P., & Tufo, H. M. 2001, in 20th Texas Symposium on relativistic astrophysics, ed. Wheeler, J. C., & Martel, H., 586, p. 484–486
Numerical simulations of thermonuclear flashes on neutron stars [link]
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., Truran, J. W., MacNeice, P., & Tufo, H. 2001, Nuclear Physics A, 688, p. 172–176
Helium Detonations on Neutron Stars [link]
Zingale, M., Timmes, F. X., Fryxell, B., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., MacNeice, P., & Tufo, H. M. 2001, ApJS, 133, p. 195–220
Large-scale simulations of clusters of galaxies [link]
Ricker, P. M., Calder, A. C., Dursi, L. J., Fryxell, B., Lamb, D. Q., MacNeice, P., Olson, K., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2001, in American Institute of Physics Conference Series, 583, p. 316–318
Adaptive mesh simulations of astrophysical detonations using the ASCI flash code [link]
Fryxell, B., Calder, A. C., Dursi, L. J., Lamb, D. Q., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2001, in American Institute of Physics Conference Series, 583, p. 223–225
A Case Study in Application I/O on Linux Clusters [link]
Ross, R., Numi, D., Cheng, A., & Zingale, M. 2001, in Proceedings of SC2001

2000

FLASH: An Adaptive Mesh Hydrodynamics Code for Modeling Astrophysical Thermonuclear Flashes [link]
Fryxell, B., Olson, K., Ricker, P., Timmes, F. X., Zingale, M., Lamb, D. Q., MacNeice, P., Rosner, R., Truran, J. W., & Tufo, H. 2000, ApJS, 131, p. 273–334
On the Cellular Structure of Carbon Detonations [link]
Timmes, F. X., Zingale, M., Olson, K., Fryxell, B., Ricker, P., Calder, A. C., Dursi, L. J., Tufo, H., MacNeice, P., Truran, J. W., & Rosner, R. 2000, ApJ, 543, p. 938–954
Flash Code: Studying Astrophysical Thermonuclear Flashes [link]
Rosner, R., Calder, A. C., Dursi, L. J., Fryxell, B., Lamb, D. Q., Niemeyer, J. C., Olson, K., Ricker, P., Timmes, F. X., Truran, J. W., Tufo, H., Young, Y., Zingale, M., Lusk, E., & Stevens, R. 2000, Computing in Science and Engineering, 2, p. 33
High-Performance Reactive Fluid Flow Simulations Using Adaptive Mesh Refinement on Thousands of Processors [link]
Calder, A. C., Curtis, B. C., Dursi, L. J., Fryxell, B., Henry, G., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F. X., Tufo, H. M., Truran, J. W., & Zingale, M. 2000, in Proceedings of SC2000
Helium Detonations on Neutron Stars [link]
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., & Rosner, R. 2000, in Nuclear Astrophysics, 2000, ed. Hillebrandt, W., & Müller, E., p. 38